Presented By: Department of Computational Medicine and Bioinformatics DCMB
Tools and Technology Seminar by Jim Clauwaert
“Discovering coding sequences using Transformer networks”
Abstract
The biological process of RNA translation is fundamental to cellular life and has wide-ranging implications for human disease. Accurate delineation of RNA translation variation represents a significant challenge due to the complexity of the process and technical limitations. We explore the use of a transformer-based networks to leverage the analysis of transcript sequences and ribosome profiling data. I will detail the implementation of this model and how it is currently used in ongoing studies to discover translation products.
About the DCMB Tools & Technology Seminar Series
The DCMB Tools and Technology Seminar Series is held in Palmer Commons, Room 2036, each Thursday at 12pm EST. Each seminar highlights a computational tool, technology, or methodology that is under development or in current use and is of special interest to DCMB and University researchers. Presenters are U-M researchers and students.
These seminars are live-streamed and recorded and made available for future viewing via the DCMB YouTube Channel
The biological process of RNA translation is fundamental to cellular life and has wide-ranging implications for human disease. Accurate delineation of RNA translation variation represents a significant challenge due to the complexity of the process and technical limitations. We explore the use of a transformer-based networks to leverage the analysis of transcript sequences and ribosome profiling data. I will detail the implementation of this model and how it is currently used in ongoing studies to discover translation products.
About the DCMB Tools & Technology Seminar Series
The DCMB Tools and Technology Seminar Series is held in Palmer Commons, Room 2036, each Thursday at 12pm EST. Each seminar highlights a computational tool, technology, or methodology that is under development or in current use and is of special interest to DCMB and University researchers. Presenters are U-M researchers and students.
These seminars are live-streamed and recorded and made available for future viewing via the DCMB YouTube Channel
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