Presented By: Mathematical Biology - Department of Mathematics
Mathematical Biology Seminar: Cyanobacterial Clocks: How do they work, and what are they good for?
David Lubensky, PhD (University of Michigan)
All plants and animals and many unicellular organisms possess circadian clocks--autonomous oscillators with a roughly 24 hour period that allow them to anticipate daily cycles of light and dark. I will discuss recent progress on understanding one such biological clock, in the photosynthetic bacterium S. elongatus. This system has the remarkable feature that the core biochemical oscillator can be reconstituted in vitro with only three purified proteins. Thus, unlike almost all other circadian clocks studied to date, it requires neither transcription nor translation but functions entirely post-translationally. After reviewing what we know about how the in vitro oscillator functions, as well as a few outstanding puzzles, I will turn my attention to the implications of this understanding for clock function in the living cell. In particular, I will use biophysical models to address two questions: How does the clock continue to tick robustly in the noisy cellular environment? And what selective advantage does the clock provide? In the former case, I will argue that the core post-translational oscillator is necessary to make the clock robust to several perturbations present in any growing, dividing cell, but that other specific adaptations are also required. In response to the latter question, I will present efforts to quantify the clock's contributions to fitness through anticipating diurnal environmental changes and through rejecting environmental noise.